Work with microbiologists to develop a pipeline for analysis of Campylobacter spp. whole genome sequencing data. This will involve processing of raw sequencing reads, genome assembly, submission of data to public databases, variant mapping, and phylogenetic analysis. The individual will also work with public health professionals at the Tennessee Department of Health (TDH). The role in this joint effort will be to provide data based on outputs from the pipleline, which will inform TDH investigations of campylobacteriosis within Tennessee. Additionally, the individual will assist with knowledge transfer by participating as part of a team in workshop and webinar development and delivery.
Required Qualifications: An earned doctorate in Bioinformatics, Computational Biology, Statistics, Microbiology, Food Science, or other relevant field. Demonstrated knowledge of bioinformatics and basic knowledge of relevant computer programming languages (such as Python, Perl, Bash, R, etc). Proven excellence in verbal and written communication skills, including a strong scientific, peer-reviewed publication record in bioinformatics and/or computational biology-related topics. Communicate effectively with non-computational researchers and be time-responsive
The University of Tennessee, Institute of Agriculture is seeking candidates who have the ability to contribute in meaningful ways to the diversity and intercultural goals of the University. Applicants should submit: 1) a letter of application, 2) a curriculum vitae detailing education background qualifications, research and teaching experience, and publications, 3) unofficial transcripts of all college course work, and 4) names and contact information (including e-mail addresses) of three individuals who will serve as references.
Submit all application materials using the following link: